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RNAplex | ViennaRNA

Scan for favorable RNA-RNA interaction sites and duplex energies.

Overview

Scan for favorable RNA-RNA interaction sites and duplex energies.

Run RNAplex | ViennaRNA on Neurosnap

The RNAplex | ViennaRNA online webserver allows anybody with a Neurosnap account to run and access RNAplex | ViennaRNA, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong Terms of Use and Privacy Policy.

RNAplex | ViennaRNA service preview

Features

  • Runs the RNAplex calculation on submitted RNA input.
  • Reports calculation results in a downloadable table.
  • Provides the original scientific program output for detailed inspection.

Statistics

Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.

Statistic Value
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API Request

Access RNAplex | ViennaRNA using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.

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Citations

Please cite the original work when using RNAplex | ViennaRNA in publications or research outputs.

Lorenz et al. 2011. ViennaRNA Package 2.0. Algorithms for Molecular Biology 6:26. https://doi.org/10.1186/1748-7188-6-26.

Neurosnap Inc. (2022). Neurosnap: An online platform for computational biology and chemistry. Available at: https://neurosnap.ai/

Set up your run

Configure RNAplex | ViennaRNA

Choose your inputs and settings, then review the estimated credits before submitting.

Use a note to recognize this job later. It does not affect the results.

Inputs & configuration

Loading inputs and options... validating knobs, tuning dials, and staging your experiment.

Ready to submit your job?

Review your configuration, then confirm the estimated credit cost before you run the job.

Note that credit estimates are not guaranteed and runtime can vary depending on inputs and settings.

Estimated Credits: calculating...

To submit a job please login or register an account.