ProTrek
Search Swiss-Prot proteins, structures, and annotations with sequence, structure, or text queries.
Overview
Search UniProtKB/Swiss-Prot using a protein sequence, single-chain structure, or functional description. ProTrek 650M retrieves related proteins, structural representations, or annotations from the complete published Swiss-Prot database.
Run ProTrek on Neurosnap
The ProTrek online webserver allows anybody with a Neurosnap account to run and access ProTrek, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong Terms of Use and Privacy Policy.
Features
- Search from amino acid sequences, single-chain structures, or natural-language descriptions.
- Retrieve proteins, structural representations, or any of 56 Swiss-Prot annotation categories.
- Inspect ranked matching scores and download CSV results.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
| Statistic | Value |
|---|---|
| Credit Usage Rate | loading... |
| Estimated Total Cost | loading... |
| Runtime Mean | loading... |
| Runtime Median | loading... |
| Runtime Standard Deviation | loading... |
| Runtime 90th Percentile | loading... |
| Runtime Longest | loading... |
API Request
Access ProTrek using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
Similar Tools
Explore tools with similar features, categories, and use cases.
Citations
Please cite the original work when using ProTrek in publications or research outputs.
|
A trimodal protein language model enables advanced protein searches. Nature Biotechnology (2025). doi:10.1038/s41587-025-02836-0. |
|
Neurosnap Inc. (2022). Neurosnap: An online platform for computational biology and chemistry. Available at: https://neurosnap.ai/ |