Use CodonTransformer
Official Neurosnap webserver for accessing CodonTransformer online.
Overview
A multispecies codon optimization model that leverages attention-based deep learning to generate host-specific DNA sequences with natural-like codon usage profiles. Trained on over 1 million DNA-protein pairs from 164 organisms, it enables context-aware, high-fidelity predictions tailored to protein expression needs.
Neurosnap Overview
The CodonTransformer online webserver allows anybody with a Neurosnap account to run and access CodonTransformer, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong terms of service and privacy policy.
View PaperFeatures
- Multispecies support spanning 164 organisms across all kingdoms of life.
- Context-aware predictions using transformer-based attention mechanisms.
- Customizable optimization with control over stochasticity, sequence matching, and output diversity.
- Supports batch inference and automatically handles ambiguous amino acids.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
| Statistic | Value |
|---|---|
| Credit Usage Rate | loading... |
| Estimated Total Cost | loading... |
| Runtime Mean | loading... |
| Runtime Median | loading... |
| Runtime Standard Deviation | loading... |
| Runtime 90th Percentile | loading... |
| Runtime Longest | loading... |
API Request
Access CodonTransformer using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
Job Note
Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.
Configuration & Options
Ready to submit your job?
Once you're done just hit the submit button below and let us do the rest.
To submit a job please login or register an account.