Interaction Analysis
Detect and summarize molecular interactions across uploaded structures.
Overview
Analyze protein and biomolecular structures for hydrogen bonds, salt bridges, van der Waals contacts and clashes, disulfide bonds, metal coordination, covalent records, and geometric contacts using the Neurosnap interaction engine.
Run Interaction Analysis on Neurosnap
The Interaction Analysis online webserver allows anybody with a Neurosnap account to run and access Interaction Analysis, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong Terms of Use and Privacy Policy.
Features
- Detects hydrogen bonds, salt bridges, van der Waals contacts and clashes, disulfides, coordination, covalent records, and geometric contacts from uploaded structures.
- Reports interaction records with source filenames and aggregate summary statistics across the uploaded structures.
- Adjustable metal coordination, hydrogen bond, and salt bridge distance cutoffs, with optional filtering to residues of interest.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
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| Runtime 90th Percentile | loading... |
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API Request
Access Interaction Analysis using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
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Citations
Please cite the original work when using Interaction Analysis in publications or research outputs.
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Amani, Keaun, and Danial Gharaie Amirabadi. 2024. Neurosnap SDK Package. Software. https://github.com/NeurosnapInc/neurosnap. |
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Neurosnap Inc. (2022). Neurosnap: An online platform for computational biology and chemistry. Available at: https://neurosnap.ai/ |