AlphaFlow
Use AlphaFlow to generate protein structures that closely reflect experimental and physiological conditions.
Overview
Use AlphaFlow's large variety of models to generate protein structures that closely reflect experimental and physiological conditions using ESMFLow and AlphaFlow models trained on experimental structures and molecular dynamics trajectories.
Run AlphaFlow on Neurosnap
The AlphaFlow online webserver allows anybody with a Neurosnap account to run and access AlphaFlow, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong Terms of Use and Privacy Policy.
Features
- Generate many protein conformations resembling experimental and physiological ensembles.
- Supports sequence input for generating conformations.
- Provides four model choices to fit experimental design parameters.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
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API Request
Access AlphaFlow using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
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Citations
Please cite the original work when using AlphaFlow in publications or research outputs.
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Jing, B. et al., AlphaFold Meets Flow Matching for Generating Protein Ensembles, https://arxiv.org, 07 February 2024, https://arxiv.org/abs/2402.04845. |
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Neurosnap Inc. (2022). Neurosnap: An online platform for computational biology and chemistry. Available at: https://neurosnap.ai/ |
Video Tutorial
The following youtube video describes how to use AlphaFlow using Neurosnap's online webserver. If you have any questions or want to suggest improvements for future tutorials please contact us here.