Use Transcript Assembly
Official Neurosnap webserver for accessing Transcript Assembly online.
Overview
Takes in raw transcriptome data from an RNAseq experiment in and automatically assembles and quantifies transcripts. No reference genome required!
Neurosnap Overview
The Transcript Assembly online webserver allows anybody with a Neurosnap account to run and access Transcript Assembly, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong terms of service and privacy policy.
View PaperFeatures
- Automatically assembles raw reads into valid transcripts without requiring a reference genome.
- Automatically quantifies transcripts.
- Automatically removes adapters and other unnecessary sequences.
- Automatically performs quality control on read data.
- Supports compressed fastq files.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
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API Request
Access Transcript Assembly using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
Job Note
Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.
Configuration & Options
Ready to submit your job?
Once you're done just hit the submit button below and let us do the rest.
To submit a job please login or register an account.