Use AFcluster
Official Neurosnap webserver for accessing AFcluster online.
Overview
Predict conformational substates using AlphaFold2 on multiple sequence alignments. A clustering method by sequence similarity allows AlphaFold2 to sample alternate states.
Neurosnap Overview
The AFcluster online webserver allows anybody with a Neurosnap account to run and access AFcluster, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong terms of service and privacy policy.
View PaperFeatures
- Predict alternative protein conformations.
- Sample clustering based on sequence similarity.
- Creates a 2D projection and cluster on the modeled proteins.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
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API Request
Access AFcluster using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
Job Note
Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.
Configuration & Options
Ready to submit your job?
Once you're done just hit the submit button below and let us do the rest.
To submit a job please login or register an account.