Use AF2Bind

Official Neurosnap webserver for accessing AF2Bind online.

Overview

Accurately predict small-molecule-binding residues.

Neurosnap Overview

The AF2Bind online webserver allows anybody with a Neurosnap account to run and access AF2Bind, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong terms of service and privacy policy.

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Features

  • Predict ligand-binding sites.
  • Employ the internal pairwise representation of AlphaFold2 for binding site prediction.
  • Dynamically set binding probability cutoffs to filter sites of interest.

Statistics

Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.

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API Request

Access AF2Bind using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.

Job Note

Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.

Configuration & Options

Service Inputs

The input PDB structure to run AF2Bind on.

This cutoff is used to build the activity analysis. Residues above your set threshold will show on the activity analysis.

Ready to submit your job?

Once you're done just hit the submit button below and let us do the rest.

To submit a job please login or register an account.