Neurosnap SDK package#
Subpackages#
- neurosnap.algos namespace
- Subpackages
- Submodules
- neurosnap.algos.LDDT module
- neurosnap.algos.alphafold module
- neurosnap.algos.amber_relax module
- neurosnap.algos.clusterprot module
- neurosnap.algos.ec_interface module
- neurosnap.algos.evoef2 module
AAppTableAtomAtomParamBondChainCharmmICDunbrackBinDunbrackLibraryDunbrackRotamerRamaTableResidueResidueTopologyStructurecalculate_binding()calculate_interface_energy()calculate_stability()load_aapropensity()load_atom_params()load_dunbrack()load_ramachandran()load_topology()rebuild_missing_atoms()
- neurosnap.algos.ipsae module
- neurosnap.algos.kluster module
- neurosnap.algos.pdockq module
Submodules#
- neurosnap.api module
NeurosnapAPINeurosnapAPI.BASE_URLNeurosnapAPI.delete_job_share()NeurosnapAPI.get_job_data()NeurosnapAPI.get_job_file()NeurosnapAPI.get_job_status()NeurosnapAPI.get_jobs()NeurosnapAPI.get_pipeline()NeurosnapAPI.get_services()NeurosnapAPI.get_team_info()NeurosnapAPI.get_team_jobs()NeurosnapAPI.set_job_note()NeurosnapAPI.set_job_share()NeurosnapAPI.submit_job()NeurosnapAPI.wait_job_status()
- neurosnap.chemicals module
- neurosnap.conformers module
- neurosnap.constants module
- neurosnap.log module
- neurosnap.msa module
- neurosnap.nucleotide module
- neurosnap.protein module
ProteinProtein.__call__()Protein.__sub__()Protein.align()Protein.calculate_center_of_mass()Protein.calculate_distance_matrix()Protein.calculate_hydrogen_bonds()Protein.calculate_interface_hydrogen_bonding_residues()Protein.calculate_protein_volume()Protein.calculate_rmsd()Protein.calculate_rog()Protein.calculate_surface_area()Protein.center()Protein.chains()Protein.distances_from_com()Protein.find_disulfide_bonds()Protein.find_hydrophobic_residues()Protein.find_interface_contacts()Protein.find_interface_residues()Protein.find_missing_residues()Protein.find_non_interface_hydrophobic_patches()Protein.find_salt_bridges()Protein.generate_df()Protein.get_aas()Protein.get_backbone()Protein.models()Protein.remove()Protein.remove_non_biopolymers()Protein.remove_nucleotides()Protein.remove_waters()Protein.renumber()Protein.save()Protein.select_residues()Protein.to_sdf()
calculate_bsa()extract_non_biopolymers()fetch_accessions()fetch_uniprot()find_contacts()foldseek_search()getAA()isoelectric_point()molecular_weight()net_charge()run_blast()sanitize_aa_seq()
- neurosnap.rendering module